Gene MMAR_2539 in Mycobacterium marinum M
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene nameMMAR_2539
Gene length1026 bp
IdentifierMMAR_2539
Location 3092729 bp
Protein summary information
Molecular mass35703.1 Da
Isoelectric point5.76
Protein length342 amino acids
Structural information
PFAMB2HRV8
Orthologs
M. tuberculosis H37RvRv3524
Cross-references
UniProtB2HRV8
Precomputed results
BLASTReport
General annotation
TypeCDS
Functionunknown, contains six NHL repeats. the NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies. it is about 40 residues long and resembles the wd repeat pfam00400. the repeats may have a catalytic activity, proteolysis of one menber has shown that the peptidyl-alpha-hydroxyglycine alpha-amidating lyase (pal) activity is localised to the repeats. one member interacts with the activation domain of tat. this interaction is mediated by the NHL repeats.
Productconserved hypothetical protein
Comments-
Functional categoryConserved hypotheticals
Coordinates
TypeStartEndOrientation
CDS30927293093754+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium marinum M|MMAR_2539|MMAR_2539
MAETPESTTKPATVTSQPRYDRSGRLSQVLAWVGIIAGAVFIAAVIFFSATFLGWYSGGHYSWHRGGAAGQLSPRSSQQSAPSQTLRLKVELPFIGLYVHTGGVAVDTAGNVYVASGGNDRVLKLPAGSSTQVELPFTGLKSPMGVAVDTVGNVYVTDSFHNRVLKLPAGSSTQVELPFTGLHRPGGVAVDAAGNVYVTDFVDNRMLKLPAGSSTQVELPFTGLHFPMGVAVDSAGNVYVTNDDNNRVLKLPAGSTTQVELPFTGLHHPVAVAVDTAGNVYAADHDNNRVLKLPAGSSTQVELPFTGLTGPMGVAVDSAGNVYVTNHDNDEVLELPAPYAS
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