Gene MMAR_4358 in Mycobacterium marinum M
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namexseB
Gene length249 bp
IdentifierMMAR_4358
Location 5364679 bp
Protein summary information
Molecular mass9080.01 Da
Isoelectric point4.34
Protein length83 amino acids
Structural information
PFAMB2HT44
Orthologs
M. tuberculosis H37RvRv1107c
Cross-references
UniProtB2HT44
Gene OntologyCytoplasm, Dna catabolic process, Exodeoxyribonuclease vii activity, Exodeoxyribonuclease vii complex
Enzyme Classification3.1.11.6
Precomputed results
BLASTReport
General annotation
TypeCDS
Functionbidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [catalytic activity: exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphomononucleotides]
Productexodeoxyribonuclease vii (small subunit) XseB
Comments-
Functional categoryInformation pathways
Coordinates
TypeStartEndOrientation
CDS53646795364927+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium marinum M|MMAR_4358|xseB
MELDDHNGETDSVTPISQLGYEACRDELIEVVRLLEQGGLDLDTSLKLWERGEVLAKRCEEHLAGARQRVADALAASEAEQD
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