Gene MMAR_5162 in Mycobacterium marinum M
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namenth
Gene length783 bp
IdentifierMMAR_5162
Location 6246887 bp
Protein summary information
Molecular mass28746.1 Da
Isoelectric point9.14
Protein length261 amino acids
Structural information
PFAMB2HK71
Orthologs
M. tuberculosis H37RvRv3674c
Cross-references
UniProtB2HK71
Gene Ontology4 iron, 4 sulfur cluster binding, Dna binding, Dna-(apurinic or apyrimidinic site) lyase activity, Base-excision repair, Endonuclease activity, Intracellular
Precomputed results
BLASTReport
General annotation
TypeCDS
Functionhas both an apurinic and/or apyrimidinic endonuclease activity and a DNA N-glycosylase activity. incises damaged DNA at cytosines, thymines and guanines. acts on a damaged strand (oxidized pyrimidines), 5' from the damaged site [catalytic activity: endonucleolytic cleavage near apurinic or apyrimidinic sites to products with 5'-phosphate].
Productendonuclease III Nth
Comments-
Functional categoryInformation pathways
Coordinates
TypeStartEndOrientation
CDS62468876247669-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium marinum M|MMAR_5162|nth
VSGGSKPTANASTPKLPKRWSEETRTALVRRARRMNRKLAQAFPHVYCELDFTSPLELAVATILSAQSTDKRVNLTTPDLFVKYQTALDYAQADRAELENLIRPTGFYRNKANSLIGLGQALVERFDGQVPATMEELVTLPGVGRKTANVILGNAFDVPGITVDTHFGRLARRWRWTAEEDPVKVEHAVGELIERKEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGLGPTEPLLAAPLVQGPETEHLLAMAGL
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