Gene MSMEG_0219 in Mycobacterium smegmatis MC2-155
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene nameMSMEG_0219
Gene length1023 bp
IdentifierMSMEG_0219
Location 245271 bp
Protein summary information
Molecular mass37811.5 Da
Isoelectric point4.7764
Protein length340 amino acids
Orthologs
M. tuberculosis H37RvRv0182c
Cross-references
UniProtA0QNZ6
Gene OntologyRegulation of transcription, dna-dependent, Sigma factor activity, Sequence-specific dna binding transcription factor activity, Dna-dependent transcription, initiation, Transport, Intracellular
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
ProductRNA polymerase sigma-70 factor, family protein
Commentsidentified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02960
Functional categoryUnknown
Coordinates
TypeStartEndOrientation
CDS245271246293-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium smegmatis MC2-155|MSMEG_0219|MSMEG_0219
MSVILRKLTTVTVLAHKLDDDSPADAFLAEAQTYRRELLAHCYRMTGSLHDAEDLVQETYLRAWKSYQGFQGRSSVRTWLYRIATNTCLTSLEGRSRRPLPSGLGTPSSAPTDQITEHHEVPWLEPLPDGDDPADPSQIVGTRESVRLAFVAALQHLSPRQRAVLVMREVLQWKASEVGEAIGASTAAVNSLLQRARAQLEAVGPNEDDKIEAPDSPQAQATLDRYIAAFEAYDIDKLVELFTEEAIWEMPPFDSWYQGPQAIGDLSRYKCPAEEPGDMRFLQTTANGQPAAAMYMLNRETGRHEAFQLHVLDITADGISHVVAFMGEGLFKKFGLPETL
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