Gene MSMEG_0402
in Mycobacterium smegmatis MC2-155
General annotation
| Type | CDS |
| Function | Unknown |
| Product | linear gramicidin synthetase subunit D |
| Comments | identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; match to protein family HMM TIGR01746 |
| Functional category | Unknown |
Coordinates
| Type | Start | End | Orientation |
|---|---|---|---|
| CDS | 458188 | 465867 | + |
Genomic sequence
Feature type
Upstream flanking region (bp)
Downstream flanking region (bp)
Update
Protein sequence
>Mycobacterium smegmatis MC2-155|MSMEG_0402|MSMEG_0402
MTAEPSTRTLLSFDLLDEDEHDQIEVWGNRAVLTDPGPTPVTIPALFAEQVVRAPDAVALVSGDRSWTYRELDEASNRLAHVLAEHGAKPGATVAFLIPRSGEAILSILSVLKTGAAYLPVDPAHPDARIGFMMSDAKPVAALTTADLRSRLDQYDLAVIDMADPAIDRRPSDALSGPRPDDLAYMTYTSGTTGVPKAVAVTHHNVTQLVSALHADLPSGPGQVWSQWHSLVFDVSVWEIWGALLHGGRLVVVPESVGSSPDDLHNLLITEKVSVLCQTPSAAGMLSPEGLESTTLIVAGEACPTELVDRWAPGRVMINAYGPTEATIYAAMSEPLTAGTGVAPIGAPVPGAALFVLDKWLRPAPEGVVGELYVAGHGVATGYIGRPDLTASRFVACPFGETGERMYRTGDLVRWGSDGQLEYLGRADEQVKIRGYRIELGEIQAALAKLDGVDQAVVIAREDRPGDKRLVGYITGTADPAQLRTALAESLPAYMVPTAVVVLDTIPLTVNGKLDRRALPAPEYRSAANDYRAPSTPAEQILADVYAQVLGVERVGVDDSFFDLGGDSILSMQVVARARAAGIQCRPRDIFVEQTVAGVARVAVAAGESHVVDEGVGPVVATPIMRWLREVDGPTGQFNQTVITQAPAGVTEDDVVVILQALLDRHATLRLRVEDTQEDTDEWSLLVPEAGAVGARECLRTVDALTDDVLVEARNRLDPAAGAMVSAVWVRETSQLVLMIHHLAVDGVSWRILLEDLNIAWAQHCTGQSIELPAGGTSFARWSALLAEHAKTDTVRDLADAWRAVTSVPQALPPVQPDTDTYVTAGQLSASLDVETTRQLLGEVPAAFRAGVQDILLVAFGLAWTEFLNRSDTPIGVDVEGHGRYDELASDVDLSRTVGWFTTKYPVALTVENLPWEQVVAGDAALGGIVKAVKEQLRSLPEGLTYGLLRYLNPEVDLGGSDPTIGFNYLGRLGAGAGELSEELWRIDQDSLALSDAASAVPMPLMHTVELNAGTIDTDNGPSLRASWTWAPSAFDEEQATRLSRLWFEALAGICAHVRGGGGGLTPSDVAPARLTQRQIDELSQRYDVTDVLPLTPVQQGLLFHSTFARGIGDDVYAVQLDITITGVLDQHRLRDAVHTVVARHPNLAARFVEQFGEPVQVLTADPMIAWRYLDLRGDDLTPDHEIEQLCAAERSAVCDLLERPTFRAALIRTSGNQHRFVLTFHHIVIDGWSLPILLQEIFAGYFGHRLPAAAPYRNFVNWLATQDATAAKAAWREVLDGFETPTLVAPPGVPGPRGIESYRVSAETTRALGELARSQHTTINTVLQAAWTQLLMRMTGQRDVAFGTAVSGRPADLAGAESMVGLLINTVPIRAKVSADTTVGDLLRQLQSHHNDTLEHEHLALNDIHHVSGHEQLFDTLFLYESYPIDTSAFMGVQELAVTEFNNREYNHYPLSVMALPGHELGLRVEYDTSVFDVSEIETLIDRFQRLLEAMIDDPARRLSSMDVVDDDERTQLDEWANRAVLTQPVDSPQSIPEVFARQVERDPEAPAVTFEGESLNYGELDEAANQLANLLAVYGAAPGKSVALMVPRSADAIVAILAVLKTGAAYLPIDPSVPAARLEFMLGDAKPVAAVTTGDLRSRFDGFDLQVVEVDDPAVEIYPSTTLLTPSPDDIAYMIYTSGTTGVPKGVAITHGNVTQVLDTLPAELPAGPGAVWSQWHSLVFDVSVWEIWGALLHGGRLVIVPESIAGSPDDLHALLVSEGVNVLYQTPSAVRMMSPEGLEGTALVVAGEACPTEVVDRWAVDRVMINAYGPTESTIYAAISAPLSPGSDVVPIGSPVPKGATFVLDEWLRPVPPGVVGELYLAGRGVGVGYVGRSGLTGTRFVACPFGEPGARMYRTGDLVRWGDDGQLQYLGRADEQVKIRGYRIELGEIQAALSDVDGVDQAVVIAREDRPGDKRLVGYITGTADPAAARSELTNRLPAYMVPAAVVTLETLPLTVNGKLDRRALPAPEYQSAQRYRAPETETEKTLAGIFAHVLGVERIGLDDSFFDLGGDSISAMRVTAAVNTALDADLSVRTLFEAPTVAKLSLHVEHDAGERTDRVSFAAVHGSDVTEVHARDLTLDKFIDAPTLRTATTLPRPDGAVQTVLLTGATGFLGRYLLLEWLRQLRRVDDKVICLVRGKSDEDARRRLEATFDTDPLLRKHFNELATERLQVVAGDKGQPNLGLDEQTWQRLAESVDLIVDSAAFVNSVLPYSELFGPNVVGTAELIRFALTSKLKPFNFVSTSDVGRQIEPSRFTEQADIRLVSATRKIEVGYANGYGNSKWAGEVLLREAHDHCGLPVAVFRSGMIMVDPTYAGQLNVTDTVSRMVLSIVATGVAPGSFYQRGDNGERQRAHFDGLPVDFVAQAITKLGWQVARSVTDSTASGFETYHVMNPHDDGIGIDTYIDWLIEAGYPIERIEDFGEWLQRFEAALQGLSDQQRQNSVLQMLTLLKQQAGELQPPVPTRGSFAPADRFQAAVRDANIGVEGEIPHVTREVIVKYVTDLQLLGLL
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