Gene MSMEG_1666 in Mycobacterium smegmatis MC2-155
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene nameMSMEG_1666
Gene length915 bp
IdentifierMSMEG_1666
Location 1761019 bp
Protein summary information
Molecular mass32656.9 Da
Isoelectric point5.174
Protein length304 amino acids
Orthologs
M. tuberculosis H37RvRv3328c
Cross-references
UniProtA0QT05
Gene OntologySigma factor activity, Sequence-specific dna binding transcription factor activity, Dna-dependent transcription, initiation, Regulation of transcription, dna-dependent
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
ProductRNA polymerase sigma-70 factor
Commentsidentified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937
Functional categoryUnknown
Coordinates
TypeStartEndOrientation
CDS17610191761933+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium smegmatis MC2-155|MSMEG_1666|MSMEG_1666
MTTAARTDQFEALRPHLLAVAYRLTGTYADAEDIVQEAWIRWAGQEAPIENLQAWLTTVVSRLGLDRLRSAAHRRESYYGEWLPEPVVTGIDGNDPLNAVVAGEDARFAAMVVLEQLSPDQRVAFVLYDGFGVPFPDIADVLGVSAASARQLASRARRAVADAPPPVDDNTHNEIAGALMAALAAGDMDGVVRLLHPDVTFTGDSNRKAPTAPRVIHGPEKVARFLFGLARRYGPNWLAGAQLALINGELGTYTPGAPAGDGYPELLPRITAMTVRDGKVCAVWDVANPDKFTGSPLGTAVRRP
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