Gene MSMEG_1804 in Mycobacterium smegmatis MC2-155
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene nameMSMEG_1804
Gene length753 bp
IdentifierMSMEG_1804
Location 1881660 bp
Protein summary information
Molecular mass27884.5 Da
Isoelectric point4.9747
Protein length250 amino acids
Orthologs
M. tuberculosis H37RvRv3286c
Cross-references
UniProtA0QTD8
Gene OntologySigma factor activity, Sequence-specific dna binding transcription factor activity, Dna-dependent transcription, initiation, Regulation of transcription, dna-dependent
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
ProductRNA polymerase sigma-F factor
Commentsidentified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02980
Functional categoryUnknown
Coordinates
TypeStartEndOrientation
CDS18816601882412+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium smegmatis MC2-155|MSMEG_1804|MSMEG_1804
MTSEYADVLDMFRELAGTTEGSPSYVRQREKIVERCLPLADHIARRFDGRGEPREDLVQVARVGLVNAVNRFDVEAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGAATAELSQRLGRAPTASELAHELDMDREEVVEGLIAGSSYNTLSIDSGGGGDEEAPAIVDTLGDLDMGLDQIDNRESLRPLLASLPERERTVLVLRFFESMTQTQIAERVGISQMHVSRLLAKSLARLRDQLQ
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