Gene MSMEG_4954 in Mycobacterium smegmatis MC2-155
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namerho
Gene length1995 bp
IdentifierMSMEG_4954
Location 5049428 bp
Protein summary information
Molecular mass71747.4 Da
Isoelectric point7.1843
Protein length664 amino acids
Orthologs
M. tuberculosis H37RvRv1297
Cross-references
UniProtA0R218
Gene OntologyAtp synthesis coupled proton transport, Rna binding, Hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, Nucleoside-triphosphatase activity, Proton-transporting two-sector atpase complex, catalytic domain, Dna-dependent transcription, termination, Transcription termination factor activity, Atp binding
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
Producttranscription termination factor Rho
Commentsidentified by match to protein family HMM PF00006; match to protein family HMM PF07497; match to protein family HMM PF07498; match to protein family HMM TIGR00767
Functional categoryUnknown
Coordinates
TypeStartEndOrientation
CDS50494285051422-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium smegmatis MC2-155|MSMEG_4954|rho
MTETDLFTADNASDTGDLSGAVKSNTAPRARSASLSTMVLPELRALAKEIGVEGASGLRKSELIAAIRAHRGESNGRTAEASSPATADAQTGEQAAEAPAPRRRERRASTRQAGAPVAEKGEAGEKAGEKTEAQPEAKTEAQPEAKAEAPAEAKTERAEKADKPAKEAQTKAAEAPEAGESQESQPRQRRERSGRQDRADRGEKDGQDGKQDQGKQDRSERDQDQQGGGQQNRGGGSGNNADSDDDGEGRQGRRGRRFRDRRRRGERGGEGGNDTELREDDVVQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRKNGLRRGDAVTGAVRVPREGDSGGQNQRQKFNPLVRLDTVNGGSVEDAKKRPEFGKLTPLYPNERLRLETSPERLSTRVIDLIMPIGKGQRALIVSPPKAGKTTILQDIANAITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEHGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFAIVHKLRRVLSGLDSHQAIDLLISQLRKTKTNYEFLVQVSKTAPGSMDVD
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