Gene MSMEG_5340 in Mycobacterium smegmatis MC2-155
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene nameMSMEG_5340
Gene length606 bp
IdentifierMSMEG_5340
Location 5425307 bp
Protein summary information
Molecular mass21996.1 Da
Isoelectric point6.5637
Protein length201 amino acids
Orthologs
M. tuberculosis H37RvRv1556
Cross-references
UniProtA0R346
Gene OntologyGO:0006350, Sequence-specific dna binding transcription factor activity, Regulation of transcription, dna-dependent
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
ProductTetR-family protein transcriptional regulator
Commentsidentified by match to protein family HMM PF00440
Functional categoryUnknown
Coordinates
TypeStartEndOrientation
CDS54253075425912-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium smegmatis MC2-155|MSMEG_5340|MSMEG_5340
MAEKSAPRRTSGGPVLLDDVTTAIEKAFFEELAAVGYGRLSVDAVARRAGVGKAAIYRRWRSKQALAADLVAKVAVTAIDVPDTGSLRGDIREYLRNGREALTHRLARKIIPDLIAEAVRDPEYGALLTDLIREPRRGRGSHIFERAIERGEIAPDADIDVALDVLAGALYWRQSILQTTADDDYLDRLTEVVLMAVGMGK
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