Gene MSMEG_5423 in Mycobacterium smegmatis MC2-155
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namemfd
Gene length3648 bp
IdentifierMSMEG_5423
Location 5505030 bp
Protein summary information
Molecular mass131113.0 Da
Isoelectric point5.0951
Protein length1215 amino acids
Orthologs
M. tuberculosis H37RvRv1020
Cross-references
UniProtA0R3C5
Gene OntologyAtp-dependent helicase activity, Dna repair, Damaged dna binding, Regulation of transcription, dna-dependent, Sequence-specific dna binding transcription factor activity, Atp binding
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
Producttranscription-repair coupling factor
Commentsidentified by similarity to SP:P37474; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM TIGR00580
Functional categoryUnknown
Coordinates
TypeStartEndOrientation
CDS55050305508677-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium smegmatis MC2-155|MSMEG_5423|mfd
MTAPGHTSVQTPIAGLVELALSDPSLQDVIRRAADRPADLALVGPASARVLVAAALAQNGPLLVVAATGREADELTAELRGVFGDSVALFPSWETLPHERLSPGVETVGARLMLLRRLARPDDETLGAPLRVVVTTTRSLLQPMAPDLVDIEPVTLSVGAEMEFEDVVARLVDLSYTRVDMVGKRGEFAVRGGILDVFPPTAEHPVRVEFWGDEISEMRAFAIADQRSIPEVPVQTVVAVPCRELLMTDDVRERAAALAAEHPTTENTVPGTVPDMLAKLAEGIPVDGMEALLPLLHPIEPTTLTRHLPEGAPVLVCDPEKVRTRAADLIKTGREFLEASWSTAAVGGDAPIDLEALGASGFVTFEEAREAAREGGHPWWTLSQLSDESAVELDIRSAPSARGSQHNLEEIFAMLRAHVATGGYAAVVTPGIGTAHRVVEQLGEADTAATILEPGTAPKAGVVGVLKGPLCSGVVLPGANLVIITETDLTGNRVTANEGRKLAAKRRNVVDPLALTAGDLVVHDQHGIGKFVEMTERVVGGARREYLVLEYASSKRGGGTDKLYVPMDSLDQLSRYVGGEAPSLSRLGGSDWANTKTKARRAVREIASELVALYAKRQSAPGHAFGPDTPWQAEMEDAFGFTETIDQLTAIQEVKSDMEKPVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFTNRMAGFPVTVKGLSRFTDPAESRAVIEGLKDGSVDVVIGTHRLLQTGVTWKDLGLIIVDEEQRFGVEHKEHIKSMRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQVAAALRRELLRDGQAFYIHNRVRTIDEAAARVRQLVPEARVVVAHGQMNEETLEKTVEGFWNREYDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPNKPLTETAYDRLATIAQNNELGAGMAVAMKDLEIRGAGNVLGAEQSGHVAGVGFDLYVRLVGEAVEAYRAAADGKTVATPQEQKDVRIDLPVDAHLPPEYIGSDRLRLEAYRRLAAAADDDAVASVVDELIDRYGPLPEPAQRLVAVARLRLLCREFGITEIGAVSASTVRLSPMVLPDSAQLRLKRMYPGGHYRATTSTVQVPLPRAGEGVGAPRIRDLELVQWVAGLVLVLNGKGQGDVDMSKFSNPAGEAKR
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