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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
General annotation
TypeCDS
FunctionUnknown
Productprobable short-chain type dehydrogenase/reductase
CommentsMb2537, -, len: 268 aa. Equivalent to Rv2509, len: 268 aa, from Mycobacterium tuberculosis strain H37Rv,(100.0% identity in 268 aa overlap). Probable ala-rich oxidoreductase, short-chain dehydrogenase/reductase (EC 1.-.-.-), equivalent to O07709|MLCL383.36c|ML0429 DEHYDROGENASE (PUTATIVE OXIDOREDUCTASE) from Mycobacterium leprae (268 aa), FASTA scores: opt: 1509, E(): 2.6e-84,(88.75% identity in 267 aa overlap). Also highly similar to others e.g. O86553|SC1F2.16c PUTATIVE DEHYDROGENASE from Streptomyces coelicolor (276 aa), FASTA scores: opt: 492, E(): 9.5e-23, (38.15% identity in 262 aa overlap); Q9I5R3|PA0658 PROBABLE SHORT-CHAIN DEHYDROGENASE from Pseudomonas aeruginosa (266 aa), FASTA scores: opt: 472,E(): 1.5e-21, (37.8% identity in 246 aa overlap); AAK22120|CC0133 OXIDOREDUCTASE (SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY) from Caulobacter crescentus (266 aa), FASTA scores: opt: 428, E(): 6.9e-19,(35.8% identity in 243 aa overlap); etc. Also highly similar or similar to oxidoreductases from Mycobacterium tuberculosis e.g. Q10782|Rv1544|MTCY48.21 PUTATIVE KETOACYL REDUCTASE (EC 1.3.1.-) (267 aa), FASTA scores: opt: 656, E(): 1.1e-32, (43.05% identity in 267 aa overlap). Contains PS00061 Short-chain alcohol dehydrogenase family signature. BELONGS TO THE SHORT-CHAIN DEHYDROGENASES/REDUCTASES (SDR) FAMILY.
Functional categoryIntermediary metabolism and respiration
Mutant
Check for mutants available at TARGET website
Coordinates
TypeStartEndOrientation
CDS27914752792281+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
       
Protein sequence
>Mycobacterium bovis AF2122-97|Mb2537|Mb2537
MPIPAPSPDARAVVTGASQNIGAALATELAARGHHLIVTARREDVLTELAARLADKYRVTVDVRPADLADPQERSKLADELAARPISILCANAGTATFGPIASLDLAGEKTQVQLNAVAVHDLTLAVLPGMIERKAGGILISGSAAGNSPIPYNATYAATKAFVNTFSESLRGELRGSGVHVTVLAPGPVRTELPDASEASLVEKLVPDFLWISTEHTARVSLNALERNKMRVVPGLTSKAMSVASQYAPRAIVAPIVGAFYKRLGGS
      
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