Gene Mb2564c
in Mycobacterium bovis AF2122/97
General annotation
| Type | CDS |
| Function | Unknown |
| Product | probable cytoplasmic peptidase pepq |
| Comments | Mb2564c, pepQ, len: 372 aa. Equivalent to Rv2535c,len: 372 aa, from Mycobacterium tuberculosis strain H37Rv,(100.0% identity in 372 aa overlap). Probable pepQ,cytoplasmic peptidase (EC 3.4.-.-), equivalent to Q9CCS1|PEPQ|ML0521 PUTATIVE CYTOPLASMIC PEPTIDASE from Mycobacterium leprae (376 aa), FASTA scores: opt: 1954,E(): 1.1e-105, (82.7% identity in 376 aa overlap). Also similar to other peptidases e.g. P54518|YQHT_BACSU PUTATIVE PEPTIDASE (BELONGS TO PEPTIDASE FAMILY M24B) from Bacillus subtilis (353 aa), FASTA scores: opt: 808, E(): 1.6e-39, (39.65% identity in 368 aa overlap); Q9KXQ8|SC9C5.16c PUTATIVE PEPTIDASE from Streptomyces coelicolor (368 aa), FASTA scores: opt: 803, E(): 3.2e-39,(43.15% identity in 380 aa overlap); Q9K950|BH2800 XAA-PRO DIPEPTIDASE from Bacillus halodurans (355 aa), FASTA scores: opt: 801, E(): 4.1e-39, (39.45% identity in 365 aa overlap); etc. Note that second part of protein is similar to second part of MTCY49.29c|Rv2089c|MT2150|MTCY49.29c PROBABLE DIPEPTIDASE (EC 3.4.13.-; BELONGS TO PEPTIDASE FAMILY M24B) from Mycobacterium tuberculosis (375 aa) (33.9% identity in 354 aa overlap) BLAST RESULTS: Score: 142 bits (359), E: 4e-33, Identities: 86/224 (38%),Positives: 119/224 (52%), Gaps: 4/224 (1%). COULD BE BELONG TO PEPTIDASE FAMILY M24B. |
| Functional category | |
| Mutant | Check for mutants available at TARGET website |
Coordinates
| Type | Start | End | Orientation |
|---|---|---|---|
| CDS | 2826097 | 2827215 | - |
Genomic sequence
Feature type
Upstream flanking region (bp)
Downstream flanking region (bp)
Update
Protein sequence
>Mycobacterium bovis AF2122-97|Mb2564c|pepQ
MTHSQRRDKLKAQIAASGLDAMLISDLINVRYLSGFSGSNGALLVFADERDAVLATDGRYRTQAASQAPDLEVAIERAVGRYLAGRAGEAGVGKLGFESHVVTVDGLDALAGALEGKNTELVRASGTVESLREVKDAGELALLRLACEAADAALTDLVARGGLRPGRTERQVSRELEALMLDHGADAVSFETIVAAGANSAIPHHRPTDAVLQVGDFVKIDFGALVAGYHSDMTRTFVLGKAADWQLEIYQLVAEAQQAGRQALLPGAELRGVDAAARQLIADAGYGEHFGHGLGHGVGLQIHEAPGIGVTSAGTLLAGSVVTVEPGVYLPGRGGVRIEDTLVVAGGTPKMPETAGQTPELLTRFPKELAIL
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