Gene Mb2893c
in Mycobacterium bovis AF2122/97
General annotation
| Type | CDS |
| Function | Unknown |
| Product | PROBABLE GCPE PROTEIN |
| Comments | Mb2893c, gcpE, len: 387 aa. Equivalent to Rv2868c,len: 387 aa, from Mycobacterium tuberculosis strain H37Rv,(99.7% identity in 387 aa overlap). Probable gcpE protein (protein e), equivalent to Q9CBU5|GCPE|ML1581 HYPOTHETICAL PROTEIN GCPE from Mycobacterium leprae (392 aa), FASTA scores: opt: 2247, E(): 6.8e-134, (87.65% identity in 388 aa overlap). Highly similar to essential gene of unknown function from Escherichia coli and other prokaryotes e.g. Q9X7W2|GCPE_STRCO|SC6A5.16 GCPE PROTEIN HOMOLOG from Streptomyces coelicolor (384 aa), FASTA scores: opt: 1965,E(): 3.8e-116, (78.2% identity in 385 aa overlap); P54482|GCPE_BACSU GCPE PROTEIN HOMOLOG from Bacillus subtilis (377 aa), FASTA scores: opt: 1157, E(): 2.6e-65,(49.55% identity in 351 aa overlap); P27433|GCPE_ECOLI|B2515|Z3778|ECS3377 GCPE PROTEIN (PROTEIN E) from Escherichia coli strains K12 and O157:H7 (372 aa), FASTA scores: opt: 984, E(): 2e-54, (44.15% identity in 360 aa overlap); etc. BELONGS TO THE GCPE FAMILY. |
| Functional category | |
| Mutant | Check for mutants available at TARGET website |
Coordinates
| Type | Start | End | Orientation |
|---|---|---|---|
| CDS | 3135884 | 3137047 | - |
Genomic sequence
Feature type
Upstream flanking region (bp)
Downstream flanking region (bp)
Update
Protein sequence
>Mycobacterium bovis AF2122-97|Mb2893c|gcpE
MTVGLGMPQPPAPTLAPRRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPRQEDADALAEIARHSQIPVVADIHFQPRYIFAAIDAGCAAVRVNPGNIKEFDGRVGEVAKAAGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVESALWEASLFEEHGFGDIKISVKHNDPVVMVAAYELLAARCDYPLHLGVTEAGPAFQGTIKSAVAFGALLSRGIGDTIRVSLSAPPVEEVKVGNQVLESLNLRPRSLEIVSCPSCGRAQVDVYTLANEVTAGLDGLDVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVRGEVIKTVPEAQIVETLIEEAMRLAAEMGEQAPGATPSGSPIVTVS
Bibliography
No article yet recorded
