Gene Mb3953c in Mycobacterium bovis AF2122/97
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene nameMb3953c
Gene length363 bp
IdentifierMb3953c
Location 4344013 bp
Protein summary information
Molecular mass13343.3 Da
Isoelectric point9.4436
Protein length120 amino acids
Orthologues
M. tuberculosisRv3922c
Cross-references
UniProtKB/TrEMBLX2BQ10, P67301
SWISS-MODELP67301
General annotation
TypeCDS
FunctionUnknown
ProductPOSSIBLE HEMOLYSIN
CommentsMb3953c, -, len: 120 aa. Equivalent to Rv3922c,len: 120 aa, from Mycobacterium tuberculosis strain H37Rv,(100.0% identity in 120 aa overlap). Possible hemolysin,highly similar to Q9L7M0|YIDD_MYCPA HYPOTHETICAL 12.4 KDA PROTEIN from Mycobacterium paratuberculosis (115 aa),FASTA scores: opt: 521, E(): 1.9e-29, (65.2% identity in 112 aa overlap). Also highly similar to Q44066|HLYA_AERHY PUTATIVE ALPHA-HEMOLYSIN from Aeromonas hydrophila (85 aa), FASTA scores: opt: 276, E(): 1.5e-12, (51.45% identity in 70 aa overlap); and to many bacterial hypothetical proteins from bacterium e.g. P22847|YIDD_ECOLI|B3704.1 HYPOTHETICAL PROTEIN from Escherichia coli strain K12 (85 aa), FASTA scores: opt: 276, E(): 1.5e-12, (51.45% identity in 70 aa overlap).
Functional categoryVirulence, detoxification, adaptation
Mutant
Check for mutants available at TARGET website
Coordinates
TypeStartEndOrientation
CDS43440134344375-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium bovis AF2122-97|Mb3953c|Mb3953c
MSLSRQSCGRVVRVTGRASARGLIFVIQVYRHMLSPLRPASCRFVPTCSQYAVDALTEYGLLRGSWLTMIRLAKCGPWHRGGWDPIPEGLTTGRSCQTDVDGANDDWNPASKRGERESFV
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