Gene ML1616c
in Mycobacterium leprae TN
General annotation
| Type | CDS |
| Function | ESSENTIAL FOR EFFICIENT PROCESSING OF 16S RRNA. PROBABLY PART OF THE 30S SUBUNIT PRIOR TO OR DURING THE FINAL STEP IN THE PROCESSING OF 16S FREE 30S RIBOSOMAL SUBUNITS. IT COULD BE SOME ACCESSORY PROTEIN NEEDED FOR EFFICIENT ASSEMBLY OF THE 30S SUBUNIT. RIMM IS NEEDED IN A STEP PRIOR TO RBFA DURING THE MATURATION OF 16S RRNA. HAS AFFINITY FOR FREE RIBOSOMAL 30S SUBUNITS BUT NOT FOR 70S RIBOSOMES. |
| Product | PROBABLE 16S RRNA PROCESSING PROTEIN RIMM |
| Comments | ML1616c, len: 179 aa. Probable rimB, 16S rRNA processing protein. Highly similar to many 16s rRNA processing proteins including: Escherichia coli SW:RIMM_ECOLI (P21504) (182 aa), Fasta scores: E(): 2.8e-10, 30.6% identity in 183 aa overlap and Mycobacterium tuberculosis Rv2907c SW:RIMM_MYCTU (Q10824) (176 aa), Fasta scores: E(): 0, 73.1% identity in 175 aa overlap. Contains Pfam match to entry PF01782 RimM, RimM. |
| Functional category | Information pathways |
| Mutant | Check for mutants available at TARGET website |
Coordinates
| Type | Start | End | Orientation |
|---|---|---|---|
| CDS | 1939459 | 1939998 | - |
Genomic sequence
Feature type
Upstream flanking region (bp)
Downstream flanking region (bp)
Update
Protein sequence
>Mycobacterium leprae TN|ML1616c|rimM
VHAHGALLELTIGRVVKAHGIGGEVVVEIRTDDPASRFCPGNILRAKDFPRGGPERRYTVVYAREHGARLLVRLAGVSDRDAADALRGSLFVIDSLDLPPIDEPDTYYDHQLEGLQVRTMMGRDVGVVAEVLHTAAGELLAVRCDSGEVLVPFVGAIVKLVSLDDGIVEIDPPKGLLDL
Bibliography
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