Gene MSMEG_1486 in Mycobacterium smegmatis MC2-155
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene nameMSMEG_1486
Gene length543 bp
IdentifierMSMEG_1486
Location 1578235 bp
Protein summary information
Molecular mass20244.7 Da
Isoelectric point6.3632
Protein length180 amino acids
Orthologs
M. tuberculosis H37RvRv0735
Cross-references
UniProtA0QSI0
Gene OntologySigma factor activity, Sequence-specific dna binding transcription factor activity, Dna-dependent transcription, initiation, Regulation of transcription, dna-dependent
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
ProductRNA polymerase sigma-70 factor
Commentsidentified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937
Functional categoryUnknown
Coordinates
TypeStartEndOrientation
CDS15782351578777+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium smegmatis MC2-155|MSMEG_1486|MSMEG_1486
MEDPEAAMMRALYDEHATALWRYALRLTGDPARAEDVVQETLLRAWRHQPDLRTGGGADGIAGPDRSPRAWLFTVARNMIIDERRSARFRNETDVPDPEQVADHATSDQVDTALDRLLLGTALRQLSDDHRAVIRRAYYQGLTTGQIAAELQIPEGTVKSRLHYAVRALKLSLQEMGVTR
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