Gene MSMEG_5072 in Mycobacterium smegmatis MC2-155
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene nameMSMEG_5072
Gene length774 bp
IdentifierMSMEG_5072
Location 5172290 bp
Protein summary information
Molecular mass29005.0 Da
Isoelectric point4.9503
Protein length257 amino acids
Orthologs
M. tuberculosis H37RvRv1221
Cross-references
UniProtA0R2D4
Gene OntologySigma factor activity, Sequence-specific dna binding transcription factor activity, Dna-dependent transcription, initiation, Regulation of transcription, dna-dependent
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
Productextracytoplasmic function alternative sigma factor
Commentsidentified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937
Functional categoryUnknown
Coordinates
TypeStartEndOrientation
CDS51722905173063-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium smegmatis MC2-155|MSMEG_5072|MSMEG_5072
MEHDDRRASQVRAGNNRVVIRVEQIENNAVHEQEGSTTIASQPVTATHAAPVSMAHLEQFTDSDWVEPSDEPTGTAVFDATGDQAAMPSWDELVRQHADRVYRLAYRLSGNQHDAEDLTQETFIRVFRSVQNYQPGTFEGWLHRITTNLFLDMVRRRGRIRMEALPEDYDRVPAEDPNPEQIYHDSRLGADLQAALDSLPPEFRAAVVLCDIEGLSYEEIGATLGVKLGTVRSRIHRGRQQLRDYLAKHSSETAQSA
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