Gene Mb2013c in Mycobacterium bovis AF2122/97
Go to browser
virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene nameMb2013c
Gene length336 bp
IdentifierMb2013c
Location 2212797 bp
Protein summary information
Molecular mass11784.4 Da
Isoelectric point8.985
Protein length111 amino acids
Orthologs
M. tuberculosis H37RvRv1990A
M. tuberculosis MTBC0mtbc0_002116
Cross-references
UniProtA0A1R3Y001
InterProIPR016040
UniProtKB/TrEMBLQ7TVB7
General annotation
TypeCDS
FunctionUnknown
ProductPOSSIBLE DEHYDROGENASE (FRAGMENT)
CommentsMb2013c, -, len: 111 aa. Equivalent to Rv1990A,len: 111 aa, from Mycobacterium tuberculosis strain H37Rv,(100.0% identity in 111 aa overlap). Possible dehydrogenase (fragment) (EC 1.-.-.-), similar to N-terminal part of several dehydrogenases and hypothetical proteins, e.g. Rv2750|MTV002.15|AL008967 from Mycobacterium tuberculosis (272 aa), FASTA scores: opt: 151, E(): 0.0045, (47.45% identity in 78 aa overlap), but lacks C-terminal part. Maybe a pseudogene. Also similar to U17129|RSU17129_7 putative short-chain alcohol dehydrogenase from Rhodococcus erythropolis (275 aa),FASTA scores: opt: 142, E(): 0.018, (54.15% identity in 48 aa overlap).
Functional categoryIntermediary metabolism and respiration
Mutant
Check for mutants available at TARGET website
Coordinates
TypeStartEndOrientation
CDS22127972213132-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium bovis AF2122-97|Mb2013c|Mb2013c
MGRLEGKVAFITGVARGQGRSHAVRLADGQARALGKVDVEACGALVGEVEVWGRDVRDDRRVFVESPADEFGACRRVARQGIRVVGLPVSQRELVEPEAGCAARRSAAGSQ
Bibliography
No article yet recorded