Gene Mb2505c
in Mycobacterium bovis AF2122/97
General annotation
| Type | CDS |
| Function | Unknown |
| Product | CONSERVED HYPOTHETICAL PROTEIN |
| Comments | Mb2505c, -, len: 161 aa. Equivalent to Rv2478c,len: 161 aa, from Mycobacterium tuberculosis strain H37Rv,(100.0% identity in 161 aa overlap). Conserved hypothetical protein, with weak similarity with many single-strand binding proteins e.g. Q9X8U3|SCH24.29 PUTATIVE SINGLE-STRAND BINDING PROTEIN from Streptomyces coelicolor (199 aa), FASTA scores: opt: 246, E(): 4.5e-08,(31.5% identity in 162 aa overlap); P46390|SSB_MYCLE|ML2684|MLCB1913.20c SINGLE-STRAND BINDING PROTEIN (SSB) (HELIX-DESTABILIZING PROTEIN) from Mycobacterium leprae (168 aa), FASTA scores: opt: 239,E(): 1e-07, (30.8% identity in 146 aa overlap); P18310|SSBF_ECOLI SINGLE-STRAND BINDING PROTEIN from Escherichia coli (178 aa), FASTA scores: opt: 116, E(): 2.9, (25.7% identity in 140 aa overlap); etc. Also similarity with Rv0054|P71711|MTCY21D4.17|SSB_MYCTU PROBABLE SINGLE-STRAND BINDING PROTEIN from M. tuberculosis (164 aa), FASTA scores: opt: 234, E(): 2e-07,(31.75% identity in 148 aa overlap). N-terminus shorter 8 aa from AAK46855|MT2553 SINGLE-STRAND DNA BINDING PROTEIN from Mycobacterium tuberculosis strain CDC1551. |
| Functional category | Conserved hypotheticals |
| Mutant | Check for mutants available at TARGET website |
Coordinates
| Type | Start | End | Orientation |
|---|---|---|---|
| CDS | 2752283 | 2752768 | - |
Genomic sequence
Feature type
Upstream flanking region (bp)
Downstream flanking region (bp)
Update
Protein sequence
>Mycobacterium bovis AF2122-97|Mb2505c|Mb2505c
MVGHIVNDLQRRKVGDQEVVKFRVASNSRRRTSDGGWEPGNSLFITVNCWGRLVTGVGAALGKGAPVIVVGHVYTSEYEDRDGIRRSSLEMRATSVGPDLSRVIVRIEKPAYTGPSAGDLPAATGTGAAGAADAPASAADSVSDVVVDDAITGHNPLPISA
Bibliography
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