Gene Mb3248c in Mycobacterium bovis AF2122/97
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namersha
Gene length306 bp
IdentifierMb3248c
Location 3552650 bp
Protein summary information
Molecular mass11289.8 Da
Isoelectric point6.6572
Protein length101 amino acids
Orthologues
M. tuberculosisRv3221A
Cross-references
InterProIPR014295, IPR024020, IPR027383
UniProtKB/TrEMBLQ7TWZ1
SWISS-MODELA0A1R3Y3M6
General annotation
TypeCDS
FunctionUnknown
Productanti-sigma factor rsha
CommentsMb3248c, -, len: 101 aa. Equivalent to Rv3221A,len: 101 aa, from Mycobacterium tuberculosis strain H37Rv,(100.0% identity in 101 aa overlap). Possible anti-sigma factor, similar to Q9XCD7|AAD41811.1 unknown protein from Mycobacterium smegmatis, linked to sigma factor sigH (see first citation below) (101 aa), FASTA scores: opt: 422,E(): 3.4e-22, (64.9% identity in 94 aa overlap); and to Q9RL96|RsrA anti-sigma factor from Streptomyces coelicolor (see second citation) (105 aa), FASTA scores: opt: 163,E(): 0.00016, (32.05% identity in 78 aa overlap).
Functional categoryInformation pathways
Mutant
Check for mutants available at TARGET website
Coordinates
TypeStartEndOrientation
CDS35526503552955-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium bovis AF2122-97|Mb3248c|rsha
MSENCGPTDAHADHDDSHGGMGCAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEGLRERLRLEIRRTTIIRGGP
Bibliography
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