Gene Mb3688c
in Mycobacterium bovis AF2122/97
General annotation
| Type | CDS |
| Function | Unknown |
| Product | PROBABLE DIPEPTIDE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER DPPC |
| Comments | Mb3688c, dppC, len: 266 aa. Equivalent to Rv3664c,len: 266 aa, from Mycobacterium tuberculosis strain H37Rv,(100.0% identity in 266 aa overlap). Probable dppC,dipeptide-transport integral membrane protein ABC-transporter (see citation below), similar to many peptide permeases e.g. Q9F351|SC9E12.04 PUTATIVE PEPTIDE TRANSPORT SYSTEM INTEGRAL MEMBRANE from Streptomyces coelicolor (305 aa), FASTA scores: opt: 901, E(): 1.1e-47,(51.15% identity in 262 aa overlap); Q9KFX1|APPC|BH0349 OLIGOPEPTIDE ABC TRANSPORTER (PERMEASE) from Bacillus halodurans (305 aa), FASTA scores: opt: 652, E(): 1.5e-32,(35.55% identity in 270 aa overlap); P94312|DPPC_BACFI DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN from Bacillus firmus (304 aa), FASTA scores: opt: 642, E(): 5.9e-32,(35.75% identity in 263 aa overlap); P24139|OPPC_BACSU|SPO0KC OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN from Bacillus subtilis (305 aa), FASTA scores: opt: 637, E(): 1.2e-31, (37.4% identity in 262 aa overlap); P26904|DPPC_BACSU|DCIAC DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN from Bacillus subtilis (320 aa),FASTA scores: opt: 621, E(): 1.2e-30, (39.9% identity in 263 aa overlap); etc. HAS SIMILARITY WITH INTEGRAL MEMBRANE COMPONENTS OF OTHER BINDING-PROTEIN-DEPENDENT TRANSPORT SYSTEMS. BELONGS TO THE OPPBC SUBFAMILY. |
| Functional category | |
| Mutant | Check for mutants available at TARGET website |
Coordinates
| Type | Start | End | Orientation |
|---|---|---|---|
| CDS | 4041022 | 4041822 | - |
Genomic sequence
Feature type
Upstream flanking region (bp)
Downstream flanking region (bp)
Update
Protein sequence
>Mycobacterium bovis AF2122-97|Mb3688c|dppC
MIAAALILLILVVAAFPSLFTAADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVYGARASVTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAIVLMQVMHHRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVLAAKALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLGVGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGALAITVLAFMMMGDALRDALDPASRAWRA
Bibliography
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