Gene Mb3688c in Mycobacterium bovis AF2122/97
Go to browser
virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namedppC
Gene length801 bp
IdentifierMb3688c
Location 4041022 bp
Protein summary information
Molecular mass27878.9 Da
Isoelectric point9.3727
Protein length266 amino acids
Cross-references
InterProIPR000515
UniProtKB/TrEMBLQ7TVZ9
SWISS-MODELA0A1R3Y5A6
General annotation
TypeCDS
FunctionUnknown
ProductPROBABLE DIPEPTIDE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER DPPC
CommentsMb3688c, dppC, len: 266 aa. Equivalent to Rv3664c,len: 266 aa, from Mycobacterium tuberculosis strain H37Rv,(100.0% identity in 266 aa overlap). Probable dppC,dipeptide-transport integral membrane protein ABC-transporter (see citation below), similar to many peptide permeases e.g. Q9F351|SC9E12.04 PUTATIVE PEPTIDE TRANSPORT SYSTEM INTEGRAL MEMBRANE from Streptomyces coelicolor (305 aa), FASTA scores: opt: 901, E(): 1.1e-47,(51.15% identity in 262 aa overlap); Q9KFX1|APPC|BH0349 OLIGOPEPTIDE ABC TRANSPORTER (PERMEASE) from Bacillus halodurans (305 aa), FASTA scores: opt: 652, E(): 1.5e-32,(35.55% identity in 270 aa overlap); P94312|DPPC_BACFI DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN from Bacillus firmus (304 aa), FASTA scores: opt: 642, E(): 5.9e-32,(35.75% identity in 263 aa overlap); P24139|OPPC_BACSU|SPO0KC OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN from Bacillus subtilis (305 aa), FASTA scores: opt: 637, E(): 1.2e-31, (37.4% identity in 262 aa overlap); P26904|DPPC_BACSU|DCIAC DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN from Bacillus subtilis (320 aa),FASTA scores: opt: 621, E(): 1.2e-30, (39.9% identity in 263 aa overlap); etc. HAS SIMILARITY WITH INTEGRAL MEMBRANE COMPONENTS OF OTHER BINDING-PROTEIN-DEPENDENT TRANSPORT SYSTEMS. BELONGS TO THE OPPBC SUBFAMILY.
Functional category
Mutant
Check for mutants available at TARGET website
Coordinates
TypeStartEndOrientation
CDS40410224041822-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium bovis AF2122-97|Mb3688c|dppC
MIAAALILLILVVAAFPSLFTAADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVYGARASVTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAIVLMQVMHHRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVLAAKALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLGVGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGALAITVLAFMMMGDALRDALDPASRAWRA
Bibliography
No article yet recorded