Gene Mb3723c in Mycobacterium bovis AF2122/97
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namevapc48
Gene length438 bp
IdentifierMb3723c
Location 4077153 bp
Protein summary information
Molecular mass16444.0 Da
Isoelectric point10.0402
Protein length145 amino acids
Orthologues
M. tuberculosisRv3697c
Cross-references
InterProIPR002716, IPR006226, IPR022907
UniProtKB/TrEMBLQ7TVW8
SWISS-MODELA0A1R3Y4X2
General annotation
TypeCDS
FunctionUnknown
Productpossible toxin vapc48. contains pin domain.
CommentsMb3723c, -, len: 145 aa. Equivalent to Rv3697c,len: 145 aa, from Mycobacterium tuberculosis strain H37Rv,(99.3% identity in 145 aa overlap). Possible conserved membrane protein, similar to many proteins from Mycobacterium tuberculosis e.g. Q10800|YS72_MYCTU|Rv2872|MT2939|MTCY274.03 (147 aa) FASTA scores: opt: 223, E(): 7.3e-08, (32.6% identity in 141 aa overlap); O53501|Rv2103c|MTV020.03 (144 aa), FASTA scores: opt: 215, E(): 2.4e-07, (31.4% identity in 137 aa overlap); O53812|Rv0749|MTV041.23 (142 aa), FASTA scores: opt: 192, E(): 7.6e-06, (31.25% identity in 144 aa overlap); etc.
Functional categoryVirulence, detoxification, adaptation
Mutant
Check for mutants available at TARGET website
Coordinates
TypeStartEndOrientation
CDS40771534077590-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium bovis AF2122-97|Mb3723c|vapc48
MSETFDVDVLVHATHRASPFHDKAKTLVERFLARPGLVYLLWPVALGYLRVVTHPTLLGAPLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIWSHDRDFRKFEGIRIRDPFSG
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