Gene Mb3442 in Mycobacterium bovis AF2122/97
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namevapc47
Gene length411 bp
IdentifierMb3442
Location 3779176 bp
Protein summary information
Molecular mass14727.9 Da
Isoelectric point5.1801
Protein length136 amino acids
Orthologues
M. tuberculosisRv3408
Cross-references
InterProIPR002716, IPR022907
UniProtKB/TrEMBLQ7TWJ5
SWISS-MODELA0A1R3Y440
General annotation
TypeCDS
FunctionUnknown
Productpossible toxin vapc47. contains pin domain.
CommentsMb3442, -, len: 136 aa. Equivalent to Rv3408, len: 136 aa, from Mycobacterium tuberculosis strain H37Rv,(99.3% identity in 136 aa overlap). Hypothetical protein,similar to other hypothetical proteins from M. tuberculosis strains H37Rv and CDC1551 e.g. O50411|Rv3384c|MTV004.42c (130 aa), FASTA scores: opt: 243, E(): 1.7e-09, (35.1% identity in 131 aa overlap); P95252|Rv1962c|MTCY09F9.02 (135 aa), FASTA scores: opt: 191, E(): 5e-06, (35.5% identity in 138 aa overlap), etc.
Functional categoryVirulence, detoxification, adaptation
Mutant
Check for mutants available at TARGET website
Coordinates
TypeStartEndOrientation
CDS37791763779586+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium bovis AF2122-97|Mb3442|vapc47
MIYMDTSALTKLLISEPETTELRTWLTAQSGQGEDAATSTLGRVELMRVVARYGQPGQTERARYLLDGLDILPLTEPVIGLAETIGPATLRSLDAIHLAAAAQIKRELTAFVTYDHRLLSGCREVGFVTASPGAVR
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